Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890199.1_cds_XP_016444862.1_39877
CDS Infomation

[gene=LOC107770112] [db_xref=GeneID:107770112] [protein=peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like] [protein_id=XP_016444862.1] [location=join(202079..202172,202261..202332,204851..204913,205007..205063,205199..205266,205346..205427,205525..205580,206428..206730,206853..206939,207655..207829,207995..208116,208287..208450,208889..209143,210847..210968,211044..211165,211291..211406,211547..211700,212183..212227)] [gbkey=CDS]
Sequence

ATGGGCGGAGTTAAGGTGACGATGGAGGTGGGAAGCGACGGCGTGGCCGTCATCACCATC
TTTAATCCTCCAGTGAACGCTCTTGCTATTCCCATTATCGCTGGATTGAAGGAGAAGTGG
ACTGAAGCGACGATGCGAAACGATGTTAAAGCTATTGTTTTAACTGGAAATGGAGGGAGA
TTTTCTGGTGGTTTTGATATCAATGTTTTTCAGAAGGTTCATGGGACTGGAGATATTTCT
CAAATGCCTGATGTTTCTGTTGATCTTGTGGTGAACACGATGGAAGATGGTAAGAAGCCT
GCAGTCGCTGCCATAGAAGGACTTGCACTAGGAGGCGGCCTGGAATTGGCATTGGGATGC
CATGCACGAATTGCTGCACCACGAGCACAACTGGGGTTGCCAGAGCTCAGTCTCGGAGTC
ATGCCTGGCTTTGGAGGTACACAACGTCTTCCGAGGCTTATAGGGTTGTCTAAAGCTGTT
GAAATGATGATGACATCTAAACCAATAATGTCGGAAGAAGGGAAGAAGCTTGGTCTTATT
GATGCCATTGCCCCTTCATCAGAGTTGTTAAAAGTATCTAGACAGTGGGCACTCGATATT
GCTGAAAGGCGCAAGCCTTGGATGCGTTCCCTTCACAAGACAGACAAAATTGGTTCCCTT
TCTGAAGCGCGTGAAGTGTTGAAGGTGGCTAGGCAACAAGTGAAACAGACAGTTAAGAAT
ATGCCTCAGCACTTGGCATGCATTGACGTAGTTGAAGATGGCATCATCCATGGAGGATAT
CATGGTGTTCTCAAGGAAGCTAAAGTATTTAAGGACCTTGTGTTGTCAGATACATCAAAG
GGTCTTGTTCATGTATTTTTTGCCCAACGGGCAACATCAAAGGTACCCTTCGTCACTGAT
ATTGGTCTCAAACCTAGGACGGTCAAGAAAGTTGCTGTAATTGGTGGAGGTTTAATGGGT
TCAGGCATAGCTACAGCTCTTGCTCTTAGTAACACATTTGTTGTACTCAAGGAAATTAAT
TCCGAGTATCTTCAGAAGGGGATGAAAGCTATTGAAGAAAATGTCCGTGGACTGGTAGCT
AGAAAGAAATTGCCACAGGGCAAAGCAGATAAAGCCCTTTCAATGGTTAAAGGTGCATTG
GGTTACTCAGATTTTAAGGATGTGGATGTGGTCATAGAGGCTGTAATTGAAAATATTCCG
CTAAAACAGAAAATATTCAGTGAAATTGAGAAGGTGTGCCCTCCACATTGTATTTTGGCA
AGTAACACATCCACTATCGACCTCAATGTTATTGGAGAAAATACCAGATCCAAGGATAGG
ATTATAGGGGCCCACTTTTTCAGTCCTGCTCACATTATGCCTCTGCTGGAGATAGTACGA
ACAGAGAAGACATCTGCGCAAGCAATTCTTGACCTTATGGCTGTTGGCAAGGCAATTAAG
AAAGTGCCTGTTGTGGTGGGAAATTGTACTGGCTTTGCTGTCAATAGGACCTTCTTTCCC
TACGCCCAGGGCGCACATATTCTGGCCAATCTAGGAGTGGATGTCTACAGGATCGATGCG
CAAATCACCAACTTTGGTCTCCCTATGGGTCCATTCCAGCTTCAGGATTTAACAGGATAT
GGAGTGGCTGTTGCTGTAGGGAAAGAATTTGGGTCAGCTTTTTCTGATCGAACATTTAAG
TCTCCATTGATCAACCTTCTTATAAAAAGTGGTCGAAATGGTAAAAATAATGGAAAAGGA
TACTACATTTACGAAAAGGGAAGGAAGCCAAGACCTGATTTTACGGTGCTTCCAATTATT
GAGGAATCAAGAAGGCTCACCAACGTAATGCCTGGAGGAAAGCCAATATCTGTCACTGAC
CAAGAAATTGTTGAGATGATACTCTTTCCAGTTGTGAATGAGGCATGTCGTGTTTTGGAT
GAGGGGATAGTAGTCCGAGCATCTGACCTTGATGTCGCTTCTGTTTTTGGCAGAGGTGGT
ATTGTTTTTTGGGCTGACACTGTTGGAGCGGGCCGTATATATAGAAGTCTCAAGAAGTGG
TCTGAACTATATGGTAATTTCTTCAAGCCCTCAAGGTTCTTGGAAGAGAGAGCGACAAAG
GGCATCCCCTTGAGTGCACCTGCTTCTACATCTTCAGCTTCAAGGTCACGCATTTAA

Peptide Sequence

PEP ID

XP_016444862.1
PEP Infomation

PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like [Nicotiana tabacum]
Sequence

MGGVKVTMEVGSDGVAVITIFNPPVNALAIPIIAGLKEKWTEATMRNDVKAIVLTGNGGR
FSGGFDINVFQKVHGTGDISQMPDVSVDLVVNTMEDGKKPAVAAIEGLALGGGLELALGC
HARIAAPRAQLGLPELSLGVMPGFGGTQRLPRLIGLSKAVEMMMTSKPIMSEEGKKLGLI
DAIAPSSELLKVSRQWALDIAERRKPWMRSLHKTDKIGSLSEAREVLKVARQQVKQTVKN
MPQHLACIDVVEDGIIHGGYHGVLKEAKVFKDLVLSDTSKGLVHVFFAQRATSKVPFVTD
IGLKPRTVKKVAVIGGGLMGSGIATALALSNTFVVLKEINSEYLQKGMKAIEENVRGLVA
RKKLPQGKADKALSMVKGALGYSDFKDVDVVIEAVIENIPLKQKIFSEIEKVCPPHCILA
SNTSTIDLNVIGENTRSKDRIIGAHFFSPAHIMPLLEIVRTEKTSAQAILDLMAVGKAIK
KVPVVVGNCTGFAVNRTFFPYAQGAHILANLGVDVYRIDAQITNFGLPMGPFQLQDLTGY
GVAVAVGKEFGSAFSDRTFKSPLINLLIKSGRNGKNNGKGYYIYEKGRKPRPDFTVLPII
EESRRLTNVMPGGKPISVTDQEIVEMILFPVVNEACRVLDEGIVVRASDLDVASVFGRGG
IVFWADTVGAGRIYRSLKKWSELYGNFFKPSRFLEERATKGIPLSAPASTSSASRSRI

Transcript Sequence

Gene sequence data has not been registered.